Order Chroococcales
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Genus Chroococcus Nägeli
- Chroococcus limneticus Lemmermann – freshwater, Verkhneye (Upper) Lake; planktonic (Бизина, 1998: as Gloeocapsa limnetica (Lemmermann) Hollerbach). Planktonic; Ershovsky Lakes; common (Own data).
- Chroococcus minimus (Keissler) Lemmermann – planktonic, periphyton on dying filamentous algae; supralittoral basins, Verkhneye (Upper) Lake; common (Own data: Gloeocapsa minima (Keissl.) Hollerbach in Elenkin).
- Chroococcus turgidus (Kützing) Nägeli – planktonic, benthic; marine, freshwater, brackish-water, epiphyte; common, sometimes dominant (Own data: Gloeocapsa turgida (Kützing) Hollerbach in Elenkin). Coastal; on mosses; sporadic (Давыдов, 2006).
Genus Dactylococcopsis Hansgirg
- Dactylococcopsis acicularis Lemmermann – freshwater, Verkhneye (Upper) Lake; planktonic (Бизина, 1998). Supralittoral; freshwater basins, lakes; common (Own data).
- Dactylococcopsis fascicularis Lemmermann – freshwater, Verkhneye (Upper) Lake; planktonic; rare (Own data).
- Dactylococcopsis raphidioides Hansgirg – freshwater, lakes; planktonic; common (Own data).
Genus Gloeocapsopsis Geitler ex Komárek
- Gloeocapsopsis crepidinum (Thuret) Geitler ex Komàrek – on coastal rocks and cliffs; rare; planktonic; Verkhneye (Upper) Lake; common (Own data: Gloeocapsa crepidinum Thuret).
- Gloeocapsopsis magma (Brébisson) Komárek & Anagostidis – benthic (pink silt); Kislosladkoye (Sour-Sweet) Lake; common (Own data: Gloeocapsa magma (Brébisson) Kützing). Supralittoral; on stones; sporadic (Давыдов, 2006).
Family Cyanobacteriaceae
Genus Aphanothece Nägeli
- Aphanothece clathrata W. West & G. S. West – freshwater, Verkhneye (Upper) Lake; planktonic; rare (Own data).
- Aphanothece curvata Lagerheim – littoral; epiphyte; on sick Zostera plants; common (Own data).
- Aphanothece saxicola Nägeli – supralittoral; on rocks, mosses; sporadic (Давыдов, 2006).
Genus Cyanothece Komárek
- Cyanothece aeruginosa (Nägeli) Komárek – planktonic; Verkhneye (Upper) Lake; dominant; Verkhneye Ershovskoe lake; rare (own data) (as Synechococcus aeruginosus Nägeli).
Genus Gloeothece Nägeli
- Gloeothece palea (Kützing) Nägeli – supralittoral; on mosses; sporadic (Давыдов, 2006).
Family Dermocarpellaceae T. Christensen
Genus Cyanocystis Borzi
- Cyanocystis hemispaerica (Setchel & Gardner) Kaas ( = Dermocarpa hemispaerica Setchel & Gardner) – epiphyte on different red filamentous algae, common, Velikaya Salma.
- Cyanocystis olivacea (Reinsch) Komárek & Anagnostidis ( = Dermocarpa olivacea (Reinsch) Tilden) — epiphyte on red filamentous algae, streams, Velikaya Salma.
- Cyanocystis versicolor Borzi ( = Dermocarpa versicolor (Borzi) Geitler) – epiphyte on green algae Сladophora and on diatoms Melosira; rare, the mouth of the brook, Kindo peninsula.
Genus Dermocarpella Lemmermann
- Dermocarpella gilkeyae (Setchell & Gardner) Komárek & Anagnostidis – epiphyte; on filamentous algae, Velikaya Salma; rare (own data: Xenococcus gilkeyae Setchell & Gardner).
Kislaya inlet, Rugozerskaya Bay, and Chrenorechenskaya Bay
- Dermocarpella prasina (Reinsch) Komárek & Anagnostidis ( = Dermocarpa prasina (Reinsch) Bornet & Thuret) — epiphyte on filamentous algae, common, littoral and sublittoral, Velikaya Salma, Kislaya inlet, Rugozerskaya Bay, and Chrenorechenskaya Bay
Genus Sphaenosiphon Reinsch
- Sphaenosiphon minima (Geitler) P. Silva ( = Dermocarpa minima Geitler) — epiphyte on green algae Cladophora fracta, rare, littoral, Velikaya Salma.
Genus Stanieria Komárek & Anagnostidis
- Stanieria sphaerica (Setchel & Gardner) K. Anagnostidis & A. Pantazidou ( = Dermocarpa sphaerica Setchel & Gardner) = epiphyte on filamentous algae, diatoms, red and green algae, common, littoral, Velikaya Salma.
- Stanieria sublitoralis (Lindstedt) K. Anagnostidis & A. Pantazidou ( = Dermocarpa sublitoralis Lindstedt) — epiphyte on filamentous algae, common, sublittoral , Velikaya Salma.
Family Entophysalidaceae Geitler
Genus Chlorogloea Wille
- Chlorogloea tuberculosa (Hansgirg) Wille – marine, sublittoral; epiphyte on Laminaria; common (own data).
Genus Entophysalis Kützing
- Entophysalis granulosa Kützing – on cliffs; Cape Kindo, Kastyan island; common (own data)
Family Gomphosphaeriaceae Elenkin
Genus Gomphosphaeria Kützing
- Gomphosphaeria aponina Kützing – planktonic; marine, freshwater, brackish-water.; common (own data).
Family Hydrococcaceae Kützing
Genus Pleurocapsa Thuret in Hauck
- Pleurocapsa fuliginosa Hauck – fouling; on littoral stones; common (own data).
Family Microcystaceae Elenkin
Genus Gloeocapsa Kützing
- Gloeocapsa alpina (Nägeli) Brand – freshwater, Verkhneye (Upper) Lake, Vodoprovodnoye (Potable water) Lake; planktonic (Бизина, 1998).
- Gloeocapsa haematodes Kützing – benthic (pink silt); Kislosladkoye (Sour-Sweet) Lake; dominant (own data).
- Gloeocapsa minor (Kützing) Hollerbach – freshwater, Verkhneye (Upper) Lake, Vodoprovodnoye (Potable water) Lake; planktonic (Бизина, 1998).
- Gloeocapsa punctata Nägeli – planktonic; Verkhneye (Upper) Lake; rare (own data).
- Gloeocapsa varia Hollerbach – benthic; brackish-water supralittoral basins; Kastyan island; common; Cape Kindo; rare (own data).
Genus Microcystis Kützing ex Lemmermann
- Microcystis aeruginosa (Kützing) Kützing – freshwater, Verkhneye (Upper) Lake, Vodoprovodnoye (Potable water) Lake; planktonic (Бизина, 1998).
- Microcystis flos-aquae (Wittrock) Kirchner – coastal; on dead mosses; sporadic (Давыдов, 2006).
- Microcystis minuta Kylin – plankton, benthos; Kislosladkoye (Sour-Sweet) Lake; dominant (own data).
- Microcystis pulverea (Wood) Forti in De Toni – planktonic; marine; rare; freshwater; from rare to dominant (own data).
Family Xenococcaceae Ercegovic
Genus Xenococcus Thuret in Bornet & Thuret
- Xenococcus acervatus Setchell & Gardner – epiphyte; on filamentous algae; Velikaya Salma; rare (own data).
- Xenococcus pyriformis Setchell & Gardner – epiphyte; на filamentous algae; Velikaya Salma; rare, sometimes dominant (own data).
Genus Xenotholos M. Gold-Morgan, G. Montejano & J. Komárek
- Xenotholos kerneri (Hansgirg) M. Gold-Morgan, G. Montejano & J. Komárek – epiphyte; on mosses, water plants; Verkhneye (Upper) Lake, swamps; rare (own data: Xenococcus kerneri Hansgirg).